Department of Biochemistry

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    ALABI, Kehinde Elizabeth
    (Covenant University Ota, 2025)
    Prostate cancer (PCa) remains a major health concern, particularly in Nigeria, where incidence and mortality are high. Globally, PCa is a leading malignancy among men. Genetic variations, such as single-nucleotide polymorphisms (SNPs), may influence PCa susceptibility and progression. This study investigates the association of three SNPs, rs11549465 (Hypoxia Inducible Factor 1A), rs3211938 (Cluster of Differentiation 36), and rs6152 (Androgen Receptor), with PCa risk and severity in Nigerian men. A case-control study was conducted involving 73 PCa patients and 80 healthy controls. Genotyping was performed using the TaqMan assay, and allele and genotype frequencies were calculated. The rs6152 SNP showed a higher frequency of the A/G genotype in cases (24%) than controls (9.7%), with an odds ratio of 4.95 (95% CI: 1.54–17.35; p = 0.0091), suggesting a significant association with increased PCa risk. For rs11549465, the C/T genotype was more prevalent in cases (10.1%) than controls (2.6%), with an OR of 0.24 (95% CI: 0.02–1.33; p = 0.061), indicating a possible protective effect, though not statistically significant. The rs3211938 SNP showed no significant association with PCa risk. No investigated SNP showed a statistically significant association with the Gleason score. For rs11549465, the mean score for C/C was 7.34 compared with 7.75 for C/T (Mann–Whitney U = 66.0, p = 0.673). For rs3211938, T/T had a mean of 7.29 versus 7.64 for G/T (Mann–Whitney U = 199.0, p = 0.407). For rs6152, A/A, A/G, and G/G showed mean scores of 7.36, 6.00, and 7.80, respectively (Kruskal–Wallis H = 1.62, p = 0.445). These findings suggest a significant association between rs6152 and PCa risk in Nigerian men, highlighting the role of genetic factors in susceptibility. Further studies with larger cohorts are warranted to validate these associations and explore their potential in personalised medicine for PCa management in African populations.
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    ASSESSMENT OF FGFR2 AND FGFR4 POLYMORPHISMS IN NIGERIAN BREAST CANCER PATIENTS
    (Covenant University Ota, 2025-09) OGBODO, Peace Nzubechukwu; Covenant University Dissertation
    Breast cancer (BC) persists as the most frequently occurring cancer in females, with a growing incidence percentage in sub-Saharan Africa. BC has been correlated with FGFR2 and FGFR4 genetic variations in different populations. However, the data on Nigerian women are scarce. This study investigated the association of FGFR2 rs1219648 (A>G), FGFR2 rs2981582 (A>G), and FGFR4 rs351855 (G>A) with BC risk in a Nigerian cohort. A case-control design was employed involving 75 BC cases and 75 controls. Using blood samples, genomic DNA was extracted, and SNP genotyping was conducted with the use of TaqMan® allelic discrimination assay. Genotype and allele frequencies comparison was conducted using chi-square, odds ratios, and Fisher’s exact tests. The FGFR2 rs1219648 G allele was significantly more common (48.0%) in cases than controls (35.3%), with the GG genotype conferring a significant increase in risk (OR = 2.61, 95% CI: 1.07 - 6.64, p = 0.039). FGFR2 rs2981582 showed no significant genotype-level association, but the minor A allele was more common in cases (43.2%) than controls (31.3%) (p = 0.045). FGFR4 rs351855 was not significantly associated with BC. None of the SNPs showed association with tumour immunohistochemical subtypes. The findings identify FGFR2 rs1219648 as a significant risk factor for BC in Nigerian women and highlight the need for larger, multi-centre studies to validate these associations.
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    ASSESSMENT OF THE QUALITY ATTRIBUTES OF BIOTRANSFORMED IPOMEA INVOLUCRATA LEAVES
    (Covenant University Ota, 2025-09) OLEKA-ARIWODO, Chiamaka Jennifer; Covenant University Dissertation
    The need for functional foods has found interest in underutilised leaves with potential health benefits. An underutilised plant, Ipomoea involucrata was used for this study while Amaranthus hybridus served as the control leaves for monitoring the edible status of the experimental leaves. The aim of this research is to assess the quality attributes of Ipomoea involucrata processed with a specific probiotic-aided fermentation into health-beneficial edible vegetable. I. involucrata leaves were collected, dried, and then submerged in LAB fermentation for 0, 24, 72, and 120 hours aseptically. Post fermentation test includes nutrition analyses (including mineral content), pH, antioxidant qualities, enzymatic tests, while vitamins and phytochemicals were determined by HPLC. According to the results, the pH of both plants decreased significantly (p < 0.05). Bacterial counts increased across all fermentation days in both plants. In I. involucrata, nutritional analysis showed a significant increase in carbohydrate and Ash, but a decrease in moisture and crude fiber. FRAP results were maintained, whereas DPPH scavenging capacity and protein content fluctuated across all fermentation days. LDH activity significantly reduced before increasing again, while α-amylase activity generally increased during the 5-day fermentation. In vitamin profiles, By Day 5, vitamin A, vitamin B2 reduced, while an increase in vitamin B9 were noticed. In I. involucrata, vitamin C increased on Day 3, whereas vitamin E initially dropped. According to the phytochemical analysis, rutin, catechin, resveratrol and kaempferol decreased, while the phenolic compounds like epicatechin and ellagic acid increased. Saponins revealed that stevioside increased and ginsenosides fluctuated. Mineral analysis significantly decreased in heavy elements including lead and cadmium. In this study, LAB fermentation improved the phytochemical and nutritional profile of I. involucrata, mainly by enriching bioactive substances, modifying vitamins and enzymes, and reducing toxic metals.
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    ASSOCIATION OF COMT AND CYP1B1 POLYMORPHISMS WITH PROSTATE CANCER RISK IN NIGERIAN MEN
    (Covenant University Ota, 2025-09) Pirisola, Ayomikun Joshua; Covenant University Dissertation
    Prostate cancer (PCa) disproportionately affects men of African descent, with Nigeria recording high mortality rates, yet genetic studies in this population remain sparse. This study investigated the association between COMT rs4680 Val158Met, rs9332377, and CYP1B1 rs1056836 genetic variants and PCa risk and severity in Nigerian men. This case-control study involved 65 histologically confirmed PCa patients aged (median) 65 years old and 59 healthy controls aged (median) 60 years old. Genomic DNA was extracted from whole blood. Genotyping was conducted via TaqMan real-time PCR. Chi-square tests were conducted to compare genotype/allele frequencies, and associations were estimated using unadjusted logistic regression odds ratios (ORs) with 95% confidence intervals. Kruskal-Wallis tests and Spearman correlations were used to examine correlations with Gleason scores. Findings showed that there is a significant genotype and allele difference in COMT rs4680, where low-activity AA is the genotype that presents high risk (OR=9.50, 95% CI: 3.08-36.42, p<0.001 vs. GG), under genotypic as well as dominant models. In the case of rs9332377, the effect of the TT genotype showed a trend towards a protective effect but did not reach statistical significance (OR=0.21, 95% CI: 0.03-0.94, p=0.062 vs. CC). There were significant differences in CYP1B1 rs1056836, with the C alleles higher in cases (83.7% vs. 13.6%), and the GG risk being borderline (OR=4.074, p=0.056). None of the variants were significantly correlated with Gleason scores (p>0.05), although there was a trend in the case of rs1056836 (Spearman rho=0.263, p=0.089). These results suggest that genetic variation in COMT and CYP1B1 may contribute to PCa susceptibility among Nigerian men, potentially through impaired oestrogen detoxification pathways. Further validation in larger cohorts, with adjustments for environmental factors and comparisons across populations, is needed to clarify these associations.
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    ASSOCIATION OF IL6, TNF-α and IL10 POLYMORPHISM WITH PROSTATE CANCER RISK AND SEVERITY IN NIGERIAN MEN
    (Covenant University Ota, 2025-09) ALEEM, Adeola Abibat; Covenant University Dissertation
    One of the critical health burdens in Nigeria is prostate cancer (PCa) with high risk and death, especially men of African indigene. Persistent inflammation is influenced by soluble molecules such as interleukin-6 (IL6), tumor necrosis factor-alpha (TNFα), and interleukin-10 (IL10), which influences PCa development and malignancy, with single nucleotide polymorphisms (SNPs) in these genes influencing disease susceptibility and severity. This study investigated the association of IL6 (rs1800795), TNFα (rs1800629), and IL10 (rs1800872) SNPs with PCa risk and severity in a Nigerian cohort comprising 75 PCa victims and 81 healthy controls. Genotype and allele frequencies were determined using TaqMan SNP genotyping, and associations with PCa risk and severity (assessed via Gleason scores) were analysed. The results showed no statistical relationship between the studied SNPs and PCa risk. Specifically, rs1800629 showed a predominance of the GG genotype (85.7% cases, 86.4% controls) with a low minor allele frequency (MAF) for the A allele (7.04% cases, 6.72% controls; OR = 0.96, 95% CI: 0.39–2.38, p = 0.930), and no correlation with Gleason scores (p = 0.58). For rs1800872, genotype frequencies (TT: 14.3% cases, 16.9% controls; TG: 50.0% cases, 58.4% controls; GG: 35.7% cases, 24.7% controls). The minor T allele was less frequent in cases (39.3%) than in controls (46.1%), suggesting a protective effect, though the difference is not statistically significant. No meaningful associations was observed with PCa risk and the genotypes (OR = 1.711, GG vs. TT, p = 0.301; OR = 1.017, TG vs. TT, p = 0.971) or with Gleason scores (p = 0.95). Notably, rs1800795 exhibited complete monomorphism (GG genotype in all subjects), precluding its analysis as a biomarker for PCa risk or severity. The lack of significant associations may be attributed to population-specific genetic profiles, particularly the monomorphism of rs1800795 and low MAF of rs1800629, as well as the limited sample size, which constrained statistical power. These findings show the importance of population-specific genetic studies, as allele frequencies and their disease associations vary across populations. Future research should involve larger cohorts, genome-wide association studies, and functional analyses to explore other IL-6 SNPs, gene-environment interactions, and novel PCa-associated variants in Nigerians, contributing to improved molecular epidemiology and potential biomarkers for early diagnosis and targeted therapies in African populations.
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    COMPARATIVE EXPRESSION PROFILING OF SELECTED GLUTATHIONE S-TRANSFERASE GENES IN BLOOD-FED AND DELTAMETHRIN-EXPOSED Anopheles gambiae
    (Covenant University Ota, 2025-09) FOLAMADE, Joshua Kayode; Covenant University Dissertation
    Malaria remains a leading public health challenge in sub-Saharan Africa, with Nigeria contributing the highest global burden. Anopheles gambiae is the major vector of this disease in Nigeria. Vector control strategies rely heavily on pyrethroid-based tools such as long-lasting insecticidal nets and indoor residual spraying. Metabolic resistance mediated by glutathione S-transferases (GSTs), particularly GSTe2, GSTe3, and GSTMS3, has been implicated in pyrethroid detoxification. Meanwhile, blood feeding induces profound physiological and molecular changes in mosquitoes, including alterations in detoxification pathways, suggesting a potential interaction with insecticide resistance. This study investigated how blood feeding and deltamethrin exposure influence the expression of GSTe2, GSTe3, and GSTMS3 in An. gambiae from Ota, Ogun State, Nigeria. Mosquitoes were reared from field-collected larvae and assigned to four experimental groups: blood-fed + deltamethrin exposed, blood-fed only, sugar-fed + deltamethrin exposed, and sugar-fed only (control). Susceptibility to deltamethrin was assessed using WHO bioassays and gene expression was quantified by qPCR. Results showed that blood-fed mosquitoes were significantly more susceptible to deltamethrin than sugar-fed counterparts, with higher mortality and faster knockdown times. At the molecular level, GSTe2 expression was generally down-regulated following deltamethrin exposure, while GSTe3 and GSTMS3 exhibited variable responses depending on feeding status. It was observed that blood feeding was the most consistent factor influencing GST expression, with insecticide exposure exerting context-dependent effects. These findings highlight that blood feeding modulates detoxification gene expression and susceptibility outcomes in An. gambiae, which implies dynamic physiological influences on resistance phenotypes. By integrating ecological behavior with molecular resistance mechanisms, this study underscores the importance of accounting for feeding status in resistance monitoring and vector control strategies. Locally relevant data such as these are critical for guiding malaria control interventions in Nigeria’s high-burden regions.
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    DETECTION OF kdr AND rdl MUTATIONS IN PERMETHRIN-EXPOSED Anopheles gambiae
    (Covenant University Ota, 2025-09) AKANNI, Mosunmola Hannah; Covenant University Dissertation
    The emergence of insecticide resistance in malaria vectors compromises the effectiveness of vector control interventions, including long-lasting insecticidal nets and indoor residual spraying. This study assessed insecticide resistance, species composition, and the mechanism of resistance in Anopheles gambiae mosquitoes. Larvae and pupae were gotten from Nestle, Ota, Ogun state, Nigeria and were reared to adulthood at the Covenant University Insectary, 3-5 days non-blood fed female mosquitoes were exposed to 0.75% permethrin according WHO tube assay protocol, polymerase chain reaction was used to detect Anopheles gambiae species and allele specific polymerase chain reaction was used to detect kdr and rdl mutation. WHO susceptibility assays revealed resistance to permethrin. Molecular identification confirmed that An. gambiae was the predominant species, indicating a high risk of malaria transmission. Genotyping of the kdr west (L1014F) and rdl loci showed high frequencies of resistant alleles, with the heterozygous RS genotype being the most common in both loci. Hardy–Weinberg analyses revealed a non-random distribution of genotypes, reflecting selection pressure from insecticide exposure. Co-occurrence analysis suggested that kdr and rdl mutations largely occur independently, indicating that multi-resistance is emerging but not yet widespread. This study provides insight into the genetic basis and prevalence of insecticide resistance in malaria vectors, suggesting the need for continuous surveillance and evidence-based vector control approaches to preserve the efficacy of malaria interventions in Nigeria.
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    EFFECTS OF INTERLEUKIN- 6 MEDIATED INFLAMMATION ON TELOMERASE EXPRESSION IN MALARIA PATIENTS
    (Covenant University Ota, 2025-09) FIAMITIA, Carrin; Covenant University Dissertation
    Malaria remains a major global health burden that mostly affects young children in the African region, which has been associated with cellular aging and immune system exhaustion that is potentially mediated through telomere shortening and altered telomerase activity. The influence of malaria on the catalytic subunit hTERT, and how it modulates telomerase expression, in relation to the proinflammatory cytokines such as interleukin-6 (IL-6) and interferon-gamma (IFN-γ) is yet to be established. This study, therefore, aimed to explore the relationship between IL-6, IFN-γ levels, and hTERT gene expression in individuals with malaria infection. Ethical approval was obtained from the Covenant Health Research Ethics Committee (CHREC) before commencement of the study. A total of 50 malaria-infected samples were collected from ACE-Medicare and Covenant University Medical Center. Plasma generated from venous blood samples (5 ml) was separated by centrifugation, collected, and stored at –80 °C for subsequent cytokine analysis. Total RNA was extracted for cDNA synthesis and RT-qPCR-based quantification of hTERT expression. RNA concentration, integrity, and purity were analyzed using a Nanodrop spectrophotometer. A portion of the plasma (100 μl) was used for cytokine analysis using human IL-6 and IFN-γ using ELISA technique. Interleukin-6 levels (17.47 ± 25.11 pg/ml) were significantly higher (p<0.05) in the case compared to the control group (0.54 ± 0.46 pg/ml). The interferon gamma levels (117.74 ± 51.62 pg/ml) in the case group showed no significant difference (p>0.05) compared to the control group (104.50 ± 55.23 pg/ml). The Ct values of the hTERT gene expression were 33.38±4.48 in malaria patients in Nigeria, which is a possible standard range. For the first time, this study reports hTERT gene expression levels in Nigerian malaria patients and IL-6 as potential biomarkers for monitoring malaria progression, thereby providing a valuable tool for precision malaria treatment in Nigeria.
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    EFFECTS OF INTERLEUKIN- 6 MEDIATED INFLAMMATION ON TELOMERASE EXPRESSION IN MALARIA PATIENTS
    (Covenant University Ota, 2025-09) FIAMITIA, Carrin; Covenant University Dissertation
    Malaria remains a major global health burden that mostly affects young children in the African region, which has been associated with cellular aging and immune system exhaustion that is potentially mediated through telomere shortening and altered telomerase activity. The influence of malaria on the catalytic subunit hTERT, and how it modulates telomerase expression, in relation to the proinflammatory cytokines such as interleukin-6 (IL-6) and interferon-gamma (IFN-γ) is yet to be established. This study, therefore, aimed to explore the relationship between IL-6, IFN-γ levels, and hTERT gene expression in individuals with malaria infection. Ethical approval was obtained from the Covenant Health Research Ethics Committee (CHREC) before commencement of the study. A total of 50 malaria-infected samples were collected from ACE-Medicare and Covenant University Medical Center. Plasma generated from venous blood samples (5 ml) was separated by centrifugation, collected, and stored at –80 °C for subsequent cytokine analysis. Total RNA was extracted for cDNA synthesis and RT-qPCR-based quantification of hTERT expression. RNA concentration, integrity, and purity were analyzed using a Nanodrop spectrophotometer. A portion of the plasma (100 μl) was used for cytokine analysis using human IL-6 and IFN-γ using ELISA technique. Interleukin-6 levels (17.47 ± 25.11 pg/ml) were significantly higher (p<0.05) in the case compared to the control group (0.54 ± 0.46 pg/ml). The interferon gamma levels (117.74 ± 51.62 pg/ml) in the case group showed no significant difference (p>0.05) compared to the control group (104.50 ± 55.23 pg/ml). The Ct values of the hTERT gene expression were 33.38±4.48 in malaria patients in Nigeria, which is a possible standard range. For the first time, this study reports hTERT gene expression levels in Nigerian malaria patients and IL-6 as potential biomarkers for monitoring malaria progression, thereby providing a valuable tool for precision malaria treatment in Nigeria
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    EFFECTS OF JOBELYN® AND RESVERATROL ON BISPHENOL-A-INDUCED MALE REPRODUCTIVE DYSFUNCTIONS IN WISTAR RATS
    (Covenant University Ota, 2025-04) FASANYA, CHRISTIANAH BOLUWATIFE
    Recent years have shown a significant deterioration in sperm quality among men, largely attributed to prolonged exposure to environmental endocrine disruptors. Bisphenol-A (BPA), a prominent disruptor, contributes to this issue by inducing oxidative stress and disrupting the hypothalamus-pituitary-gonadal axis. The study aims to examine the effects of Resveratrol and Jobelyn on reproductive dysfunction in BPA-induced male rats. BPA was exposed to forty-two male rats, grouped into six. Every group—aside from the control, were exposed to 200 mg/kg of BPA. The treatment groups included: Group 3, which received 20 mg/kg of Resveratrol; Group 4, treated with 5 mg/kg of clomiphene citrate; Groups 5 and 6, administered 100 mg/kg and 200 mg/kg of Jobelyn, respectively; and Group 7 received a combined dose of 200 mg/kg of Jobelyn and 20 mg/kg of Resveratrol. This experiment was conducted over a duration of 28 days. The testicular, and epididymal antioxidant enzymes (glutathione-S-transferase and superoxide dismutase) and the malondialdehyde (MDA) level were evaluated. The sperm quality and serum hormonal (luteinizing hormone, testosterone, and follicle stimulating hormone) concentration were also evaluated. The results revealed that exposure to BPA significantly (p<0.05) reduced the sperm quality, activity of antioxidant enzymes, and hormonal levels compared to the control group, while it caused an increase in malondialdehyde (MDA) levels. Treatment with Jobelyn and Resveratrol significantly (p<0.05) improved sperm quality and hormonal levels, enhanced antioxidant enzyme activity, and reduced malondialdehyde (MDA) levels in comparison to BPA-induced rats. The histopathology analysis showed no structural or cellular alteration to the testes and epididymis. This study suggests that Jobelyn and Resveratrol may be beneficial in managing hormonal imbalances caused by oxidative stress in men.
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    EVALUATION OF AFROCENTRIC ARCHITECTURAL ELEMENTS FOR THE DESIGN OF OYO STATE CULTURAL CENTRE IN IBADAN, NIGERIA
    (Covenant University Ota, 2025-07) OMOTAYO, Jeremiah John; Covenant University Dissertation
    This study examined the integration of Afrocentric architectural elements for the design of a cultural centre in Ibadan, Oyo State, Nigeria. The research aimed to examine how the traditional elements can be incorporated to enhance cultural identity while aligning with modern architectural standards and building regulations. The study objectives include: evaluating the adequacy of Nigerian building regulations in supporting Afrocentric architectural integration; assessing the extent to which Afrocentric elements are implemented in selected cultural centres; analysing user satisfaction with Afrocentric architectural elements in the selected cultural centre; and developing a design framework that integrates Afrocentric design elements into an architectural design proposal of a cultural centre in Ibadan, Oyo State, Nigeria. The study adopted a qualitative research methodology employing literature review, site observation, and structured interview to collect data. Six domestic and international cultural centres were investigated of the study, they include: Oyo State Cultural Centre, New Culture Studios, Terra Kulture, Franco- Sénégalaise Cultural Centre, the National Museum of African American History and Culture (NMAAHC) and the African Cultural Heritage Centre. Observational data was collected through documenting Afrocentric motifs, materials, spatial layouts, and user interactions. Structured interviews with nine staff and visitors at the domestic cultural centres provided insights into user perceptions and experiences. The literature review drew from relevant texts and policies, including the National Building Code (2006) and Oyo State Building Regulations (2019). Content analysis was employed to systematically evaluate the observational data collected from site visits. Thematic analysis was used to interpret interview responses, while regulatory texts were content analysed to assess their provisions for Afrocentric architecture. Textual analysis was employed to examine the data from the literature review. Findings were presented through narratives, tables, drawings, photos, 3-dimentional animations and a physical model. Results reveal that the National Building Code lacks Afrocentric specificity, while Oyo State regulations offer limited cultural guidance. Afrocentric elements were partially implemented across selected cultural centres, with users expressing high satisfaction and noting enhanced experiences. Findings from the research inform an architectural design proposal demonstrating how Afrocentric elements can be effectively integrated into a cultural centre. The study contributes to the discourse on culturally responsive architecture, aiming to preserve Yoruba heritage while promoting aesthetic and functional excellence in contemporary design.
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    EVALUATION OF SYNTHETIC FLAVONOID BASED COMPOUNDS AS INHIBITORS OF Plasmodium falciparum TRANSKETOLASE
    (Covenant University Ota, 2025-09) OROGUN, Yetunde Grace; Covenant University Dissertation
    Malaria, primarily attributed to Plasmodium falciparum, remains a significant contributor to global mortality, with Africa experiencing the greatest burden, particularly in countries such as Nigeria, the Democratic Republic of Congo, and Mozambique. The rise in resistance to present therapies, including Artemisinin-based Combination Therapies (ACTs), underscores the urgent need for novel drug targets. Transketolase, a thiamine-dependent enzyme in the non-oxidative arm of the pentose phosphate pathway, is vital for parasite metabolism and structurally distinct from the human enzyme, making it a promising selective target. Twenty synthetic flavonoid-based compounds were evaluated as potential inhibitors of P. falciparum transketolase (PfTk). Molecular docking revealed strong binding affinities, while ADMET profiling showed that most compounds complied with Lipinski’s rule. Notably, Compounds 6, 7, 11, and 13 were predicted to be orally bioavailable with favorable pharmacokinetic and drug-likeness properties. The compounds were further tested in vitro against PfTk and human transketolase (hTk), with oxythiamine as the positive control, and cytotoxicity was assessed using hemolysis assays on human red blood cells. The results demonstrated that several compounds exhibited high potency and selective inhibition of PfTk with minimal activity on hTk. Among them, Compounds 6, 7, and 10 emerged as the most promising leads, combining high selectivity, oral bioavailability, and favorable safety margins. Additionally, Compounds 11 and 13, analogues of Compound 10, showed good drug-likeness and oral bioavailability, indicating potential for structural optimization. Hemolysis assays confirmed minimal red blood cell lysis across all compounds, supporting their safety. In conclusion, this study validates PfTk as a viable drug target and identifies Compounds 6, 7, and 10 as strong lead candidates, with Compounds 11 and 13 as promising analogues for further optimization and development of safe, effective antimalarial agents.
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    Frequency Of BRCA1 Polymorphisms (rs799917 and rs1799966) Among Nigerian Breast Cancer Patients
    (Covenant University Ota, 2025-03) OGUNNIYI, OLUWABUSAYO BUNMI; Covenant University, Dissertation
    Breast cancer (BCa) is the most diagnosed malignancy among women worldwide, with an estimated 2.3 million new cases and 666,103 deaths recorded in 2022. In Nigeria, BCa remains the leading cause of cancer-related mortality among women, accounting for 32,278 (25.3%) new cases and 16,322 (20.5%) deaths in 2022. Breast cancer gene 1 (BRCA1) is a tumour suppressor gene involved in DNA damage repair, cell cycle regulation, and maintenance of genome stability. Studies suggest that genetic factors, such as Single Nucleotide Polymorphism (SNPs) in the BRCA1 genes, play a pivotal role in the development of cancers. The BRCA1 gene harbors specific SNPs within its coding sequence, including rs799917 and rs1799966. These SNPs interfere with the interaction between BRCA1 mRNA and miR-638, significantly decreasing BRCA1 expression among individuals carrying these variants. Several studies have reported correlations between BRCA1 polymorphisms rs799917 and rs1799966 with the risk of BCa. However, this relationship remains controversial. This study assesses the frequency of BRCA1 rs799917 and rs1799966 polymorphisms and their association with BCa in Nigeria. The case-control study included 500 BCa patients and 200 paired healthy controls. TaqMan genotyping assay was used to determine the genotypes of rs799917 and rs1799966 polymorphisms. Using logistic regression and Pearson's chi-square test, a statistically significant difference (p < 0.05) was identified in the genotype frequencies. The G allele of rs799917(p= 0.017; OR: 1.39) showed significant associations with the risk of breast cancer in Nigeria and, while globally reported as the wild-type allele, is observed as the variant allele in our population. The C Allele of rs1799966 confers a protective risk against breast cancer. Further study should focus on functional genomics to evaluate the interaction between miR-638 and the mRNA in individuals carrying this SNP, particularly in the Nigerian population. Keywords: breast
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    GENETIC POLYMORPHISMS IN ERCC6 AND CYP17A1 AND THEIR ASSOCIATION WITH VITAMIN-D LEVELS IN NIGERIAN PROSTATE CANCER PATIENTS
    (Covenant University Ota, 2025-04) AMADI EMMANUEL CHIMUEBUKA; Covenant Uniersity Dissertation
    Prostate cancer (PCa) constitutes the principal cause of cancer-related deaths among males over 40 in Africa, especially in Nigeria. By 2030, 10.8% of males may develop PCa before 75. The aggressiveness of PCa in Blacks versus Caucasians is not well understood. Mutations in tumour-specific genes like Excision Repair Cross-Complementation Group 6 (ERCC6) and Cytochrome P450 Family 17 Subfamily A Member 1 (CYP17A1) may serve as diagnostic biomarkers. ERCC6, involved in DNA repair, and CYP17A1, key in androgen production, are linked to PCa progression. This study assessed ERCC6 rs2228528 and CYP17A1 rs4919686 polymorphisms and their relation to vitamin D (VD) and androgen receptor (AR) levels in Nigerian PCa patients. Vitamin D (VD) insufficiency is linked with increased prostate cancer (PCa) mortality and influences energy metabolism in normal prostate cells. The Androgen Receptor (AR) regulates vital genes in prostate cancer development and is more common in Black populations. Exploring ERCC6 and CYP17A1 in relation to VD and AR could improve PCa diagnosis. This study evaluated the association between ERCC6 rs2228528 (C > T) and CYP17A1 rs4919686 (A > C) polymorphisms, located in ERCC6 exon 11 and the CYP17A1 promoter, respectively, vis-à-vis VD and AR levels in Nigerian PCa patients. Genotyping employed real-time PCR with TaqMan assays, while enzyme-linked immunosorbent assay (ELISA) was used to measure VD and AR levels. The data was then analysed using Excel, SPSS, and R. Results revealed a higher presence of ERCC6 rs2228528 wildtype genotypes in cases (37%) compared to controls (30%) and a lower presence of CYP17A1 rs4919686 wildtype genotypes in cases (46%) versus controls (48%). No significant associations (p > 0.05) were found between these polymorphisms. Nevertheless, rs2228528 shows promise as a PCa biomarker. VD levels were higher in cases (52.49 ng/mL) than in control (47.93 ng/mL), while difference in androgen levels were not significant (p > 0.05). Lastly, ERCC6 polymorphism, but not CYP17A1, shows potential as a possible biomarker for PCa. Larger studies are needed for definitive conclusions. Keywords: Black Populations and Cancer, Gene
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    GENETIC POLYMORPHISMS IN ERCC6 AND CYP17A1 AND THEIR ASSOCIATION WITH VITAMIN-D LEVELS IN NIGERIAN PROSTATE CANCER PATIENTS
    (Covenant University Ota, 2025-04) AMADI, EMMANUEL CHIMUEBUKA; Covenant University Dissertation
    Prostate cancer (PCa) constitutes the principal cause of cancer-related deaths among males over 40 in Africa, especially in Nigeria. By 2030, 10.8% of males may develop PCa before 75. The aggressiveness of PCa in Blacks versus Caucasians is not well understood. Mutations in tumour-specific genes like Excision Repair Cross-Complementation Group 6 (ERCC6) and Cytochrome P450 Family 17 Subfamily A Member 1 (CYP17A1) may serve as diagnostic biomarkers. ERCC6, involved in DNA repair, and CYP17A1, key in androgen production, are linked to PCa progression. This study assessed ERCC6 rs2228528 and CYP17A1 rs4919686 polymorphisms and their relation to vitamin D (VD) and androgen receptor (AR) levels in Nigerian PCa patients. Vitamin D (VD) insufficiency is linked with increased prostate cancer (PCa) mortality and influences energy metabolism in normal prostate cells. The Androgen Receptor (AR) regulates vital genes in prostate cancer development and is more common in Black populations. Exploring ERCC6 and CYP17A1 in relation to VD and AR could improve PCa diagnosis. This study evaluated the association between ERCC6 rs2228528 (C > T) and CYP17A1 rs4919686 (A > C) polymorphisms, located in ERCC6 exon 11 and the CYP17A1 promoter, respectively, vis-à-vis VD and AR levels in Nigerian PCa patients. Genotyping employed real-time PCR with TaqMan assays, while enzyme-linked immunosorbent assay (ELISA) was used to measure VD and AR levels. The data was then analysed using Excel, SPSS, and R. Results revealed a higher presence of ERCC6 rs2228528 wildtype genotypes in cases (37%) compared to controls (30%) and a lower presence of CYP17A1 rs4919686 wildtype genotypes in cases (46%) versus controls (48%). No significant associations (p > 0.05) were found between these polymorphisms. Nevertheless, rs2228528 shows promise as a PCa biomarker. VD levels were higher in cases (52.49 ng/mL) than in control (47.93 ng/mL), while difference in androgen levels were not significant (p > 0.05). Lastly, ERCC6 polymorphism, but not CYP17A1, shows potential as a possible biomarker for PCa. Larger studies are needed for definitive conclusions.
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    IMPACT OF SELECTED ESSENTIAL OILS AND PIPERONYL BUTOXIDE ON PYRETHROID RESISTANCE IN Anopheles gambiae IN OTA
    (Covenant University Ota, 2025-09) JEGEDE, Precious Osekafore; Covenant University Dissertation
    Malaria remains a major public health challenge in Nigeria, with rising pyrethroid resistance in Anopheles gambiae undermining vector control strategies. Resistance is largely driven by detoxification enzymes and target-site mutations. Although piperonyl butoxide (PBO) is widely used as an insecticide synergist, its environmental and health risks highlight the need for safer alternatives. This study evaluated the potential of basil and geranium essential oils to inhibit detoxification enzymes, enhance permethrin efficacy, and compared their effects to PBO in An. gambiae. Adult females were collected, morphologically identified, and allocated into treatment groups for WHO susceptibility bioassays, enzyme activity assays, and allele-specific PCR (AS-PCR) for kdr mutation detection. Mosquitoes were exposed to permethrin alone (0.75%), basil or geranium essential oils at 1 (10 μL/mL), 5 (50 μL/mL), and 10% (100 μL/mL) v/v, or sub-lethal synergist assays combining permethrin (0.75%) with basil (1%), geranium (1%), or PBO (4%). Permethrin alone produced 25% mortality, confirming resistance according to WHO criteria. As separate insecticides, basil oil induced 0, 90, and 100% mortality at 10, 50, and 100 μL/mL, respectively, while geranium oil induced 10, 100, and 100% mortality at the same concentrations. In synergist assays, basil + permethrin achieved 25% mortality, geranium + permethrin 55%, and PBO + permethrin 60%. Enzyme assays showed no significant variation in GST activity, whereas cytochrome P450 activity was significantly elevated in permethrin-only treatments (p < 0.05) but remained near-control levels with basil, geranium, and PBO. AS-PCR detected a high frequency of the kdr-west L1014F allele (R = 0.76), with most mosquitoes homozygous resistant (RR). These findings confirm strong pyrethroid resistance in An. gambiae from Ota and highlight geranium oil and basil oil, as promising environmentally friendly insecticides and synergists for malaria vector control.
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    In-Silico, Nutritional and Anti-inflammatory Studies on Trametes versicolor (L.) Lloyd and Flammulina velutipes (Curtis) Singer
    (Covenant University Ota, 2025-03) IYEKEKPOLOR, OSAMUDIAME MOSES; Covenant University, Dissertation
    Mushrooms are recognized as functional foods due to their rich phytochemical diversity and nutritional and therapeutic value. This study investigated the health-promoting potential of two understudied species, Trametes versicolor and Flammulina velutipes, through an approach that integrated phytochemical analysis, nutritional profiling, anti-inflammatory investigation, and in-silico evaluation. Preliminary phytochemical screening was carried out using standard methods. Proximate and micronutrient analyses were carried out using AOAC methods. High-performance Liquid Chromatography (HPLC) was utilized for bioactive compound quantification. Anti-inflammatory activity was investigated via the albumin denaturation assay and compared with a standard anti-inflammatory drug (Prednisolone). Molecular docking was performed using the Swiss dock platform utilizing the AutoDock Vina algorithm. Preliminary phytochemical screening identified T.versicolor as rich in saponins, phenols, tannins, glycosides, and emodins, while F.velutipes contained high flavonoids, alkaloids, saponins, and phenols. Nutritional profiling revealed F.velutipes as a nutrient-dense species with higher energy (491.57 kcal/100g), protein (24.71%), and fiber (15.12%) compared to Trametes versicolor (426.73 kcal/100g, 19.66% protein, 12.42% fiber). Both mushrooms exhibited significant mineral content, including potassium, magnesium, and calcium, with F.velutipes containing elevated vitamin C (77.54 mg/100g) and T.versicolor higher vitamin B2 (2.46 mg/100g). Anti-inflammatory activity, revealed T. versicolor exhibited low potency (IC50 1.073 × 1010 μg/mL), whereas F. velutipes exhibited superior efficacy (IC50 2.858μg/mL), outperforming prednisolone (IC50 2.231 × 1014 μg/mL). Computational molecular docking against HER2, a breast cancer target, revealed T.versicolor’s bioactive compounds—rutin, apigenin, and kaempferol—with binding affinities of -5.88, -5.81, and -5.78 kcal/mol, respectively, comparable to the standard drug doxorubicin (-5.43 kcal/mol). Similarly, F.velutipes’ orientin and catechin showed binding affinities of -5.24 and -5.70 kcal/mol, highlighting their anticancer potential. These findings underscore both species as nutrient-rich functional foods with robust anti-inflammatory activity and promising therapeutic relevance against breast cancer.